2.5" is the perfect balance IMO. 3" will get you more power on the higher rpm, but if you spend most of your time in around town or traffic like me, then 3" will be a slouch. I've had both and currently have 2.5" because I don't live my life on the tracks.
What GolNat said - a 3" TBE without a tune will run like a pig in the lower RPMs. In fact, there are still plenty of people that think 2.5" is perfect for this car.